BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C12LP1|AL429553
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1190 1718 0.0
>3x_Contig1190
Length = 5329
Score = 1718 bits (866), Expect = 0.0
Identities = 867/868 (99%)
Strand = Plus / Minus
Query: 1 gatcttttggttctattagtggagatggctctagtgcatccttgcccgaatatacggacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 gatcttttggttctattagtggagatggctctagtgcatccttgcccgaatatacggacc 1452
Query: 61 aaatcccataccctgtagtatttacagacggcagccctagagaaaggtttaattcgtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 aaatcccataccctgtagtatttacagacggcagccctagagaaaggtttaattcgtgta 1392
Query: 121 atgacgtggttggtttcctgctaattctttccaacctgattgtcttggaatgtagctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 atgacgtggttggtttcctgctaattctttccaacctgattgtcttggaatgtagctttg 1332
Query: 181 agaatgccagtwatataagttgtgagtgagtatcagactgcaacgagtggaagataatcg 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 agaatgccagtaatataagttgtgagtgagtatcagactgcaacgagtggaagataatcg 1272
Query: 241 agtgtcccggcataatagcaaagtagaacggtttgtgtgtattgataataaggtcgccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 agtgtcccggcataatagcaaagtagaacggtttgtgtgtattgataataaggtcgccag 1212
Query: 301 ttgattcgaacaactgaactcggcatatgtacatacttaaatcatcgttttcctcaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 ttgattcgaacaactgaactcggcatatgtacatacttaaatcatcgttttcctcaatgt 1152
Query: 361 taacatccaattcgtaaagtcgtttaaactgttcgcgcataccattgataagctcattcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 taacatccaattcgtaaagtcgtttaaactgttcgcgcataccattgataagctcattcg 1092
Query: 421 gctccacatttacgataaattgctttccatctctatccaaacatctggacgctacccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 gctccacatttacgataaattgctttccatctctatccaaacatctggacgctacccatt 1032
Query: 481 ggttagttgaagtgtcacataaaacagaccagatatccagttgtgataactgttctcgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 ggttagttgaagtgtcacataaaacagaccagatatccagttgtgataactgttctcgag 972
Query: 541 ataaagaaggccaccaactcgtgacagccatattagcaatattccgtaccccatgttttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 ataaagaaggccaccaactcgtgacagccatattagcaatattccgtaccccatgttttt 912
Query: 601 tcaccaattcaactaaattatccgagaccagctgtgaatcattaatggcatgtgtatcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tcaccaattcaactaaattatccgagaccagctgtgaatcattaatggcatgtgtatcaa 852
Query: 661 gccaggtagtgatcagtttcactattgcctgtgcaccgagcctagcaagtttattctttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gccaggtagtgatcagtttcactattgcctgtgcaccgagcctagcaagtttattctttg 792
Query: 721 taactgtaatatctacattattattgtcatttcgaagcgtgcgttccatcttggccgtcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 taactgtaatatctacattattattgtcatttcgaagcgtgcgttccatcttggccgtcc 732
Query: 781 caataatatgctgttcaccgtccatataacaccatcataaaaagaacataaggattaagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 caataatatgctgttcaccgtccatataacaccatcataaaaagaacataaggattaagg 672
Query: 841 gtcatcaaacctttccatagtttcagat 868
||||||||||||||||||||||||||||
Sbjct: 671 gtcatcaaacctttccatagtttcagat 644
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5270
Number of Sequences: 1807
Number of extensions: 5270
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)